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  • About
    • Welcome to Scanbox!
    • Scanbox system integration
    • A Quick Look at Scanbox’s GUI
  • FAQs
    • How to update Scanbox?
    • Knobby 2.0
    • basic processing pipeline
  • N: Advanced Features
    • A Plug-in Server
    • Real-time signal extraction, visualization and processing in scanbox 2.0
    • Intrinsic & epi-fluorescence imaging using the port camera
    • Sbxsegmenttool: A simple GUI for off-line segmentation
    • Scanbox does 2p-SLM stimulation! (And the mystery of the disappearing cell)
    • Mesoscope features: real-time panoramas, ROI selection, zoom/pan, and dynamic ROIs
  • Neurolabware
By: darioringach October 3, 2014January 8, 2018
M: Analysis, Uncategorized

Sorting calcium imaging signals

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M: Analysis, Uncategorized
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Posted by:darioringach

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Real-time signal extraction, visualization and processing in scanbox 2.0
Real-time, motion compensation in Scanbox

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The Scanbox Manual

  • A: Quick Start
  • B: Scanning Parameters
    • Scanning Calibration
  • D: Motion Control and Knobby
    • Motion Calibration
  • E: Camera Port
  • F: PMTs
  • G: Laser System Control
  • H: Laser Power and Pockels Cell
    • Pockels Calibration and Linearization
  • I: Behavior Monitoring
  • J: Z-Scanning
    • Z-Scanning Calibration and Linearization
  • K: Z-Stacks
  • L: External Synchronization and Control
  • M: Analysis
    • Alignment
    • Behavior Data
    • Segmentation
    • Volumetric Data
  • mesoscope
  • N: Advanced Features
  • O: Optimizations
  • P: SLM
  • Uncategorized

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